Euroasian journal of hepato-gastroenterology

Register      Login

VOLUME 4 , ISSUE 1 ( January-June, 2014 ) > List of Articles

ORIGINAL ARTICLE

Comparison of Hybrid Capture 2 Assay with Real-time-PCR for Detection and Quantitation of Hepatitis B Virus DNA

Farjana Majid, Munira Jahan, Ahmed Lutful Moben, Shahina Tabassum

Citation Information : Majid F, Jahan M, Lutful Moben A, Tabassum S. Comparison of Hybrid Capture 2 Assay with Real-time-PCR for Detection and Quantitation of Hepatitis B Virus DNA. Euroasian J Hepatogastroenterol 2014; 4 (1):31-35.

DOI: 10.5005/jp-journals-10018-1093

License: CC BY-NC 4.0

Published Online: 01-01-2013

Copyright Statement:  Copyright © 2014; The Author(s).


Abstract

Background: Both real-time-polymerase chain reaction (PCR) and hybrid capture 2 (HC2) assay can detect and quantify hepatitis B virus (HBV) DNA. However, real-time-PCR can detect a wide range of HBV DNA, while HC2 assay could not detect lower levels of viremia. The present study was designed to detect and quantify HBV DNA by real-time-PCR and HC2 assay and compare the quantitative data of these two assays. Materials and methods: A cross-sectional study was conducted in between July 2010 and June 2011. A total of 66 serologically diagnosed chronic hepatitis B (CHB) patients were selected for the study. Real-time-PCR and HC2 assay was done to detect HBV DNA. Data were analyzed by statistical Package for the social sciences (SPSS). Results: Among 66 serologically diagnosed chronic hepatitis B patients 40 (60.61%) patients had detectable and 26 (39.39%) had undetectable HBV DNA by HC2 assay. Concordant results were obtained for 40 (60.61%) out of these 66 patients by real-time-PCR and HC2 assay with mean viral load of 7.06 ± 1.13 log10 copies/ml and 6.95 ± 1.08 log10 copies/ml, respectively. In the remaining 26 patients, HBV DNA was detectable by real-time-PCR in 20 patients (mean HBV DNA level was 3.67 ± 0.72 log10 copies/ml. However, HBV DNA could not be detectable in six cases by the both assays. The study showed strong correlation (r = 0.915) between real-time-PCR and HC2 assay for the detection and quantification of HBV DNA. Conclusion: HC2 assay may be used as an alternative to real-time-PCR for CHB patients.


PDF Share
  1. Ahmad N, Alam S, Mustafa G, Adnan AB, Baig RH, Khan M. e-antigen-negative chronic hepatitis B in Bangladesh. Hepatobiliary Pancreat Dis Int 2008 Aug;7(4):379-382
  2. Epidemiology of hepatitis B virus in Bangladeshi general population. Hepatobiliary Pancreat Dis Int 2008 Dec;7(6): 595-600
  3. Hepatitis B virus is the leading cause of cirrhosis of liver in Bangladesh. Hepatol Int 2007;1:120
  4. Clinical profile: prognostic index in hepatocellular carcinoma. Bangladesh Med Res Council Bull 1991;17:49-62
  5. Identification of HBV variants which cannot produce precore derived HbeAg and may be responsible for severe hepatitis. Ital J Gastroenterol 1989;21:151-154
  6. Molecular testing in the diagnosis and management of chronic hepatitis B. Clin Microbiol Rev Jul 2007;20(3):426-439
  7. Update on diagnosis, management, and prevention of hepatitis B virus infection. Clin Microbiol Rev 1999 Apr;12(2): 351-366
  8. A multicenter study evaluation of the digene hybrid capture II signal amplification technique for detection of hepatitis B virus DNA in serum samples and testing of EUROHEP standards. J Clin Microbiol 2000 Jun;38(6):2150-2155
  9. Comparison of methods for detection of hepatitis B virus DNA. J Clin Microbiol 1994 Sep;32(9):2088-2091
  10. Lamivudine resistance in immunocompetent chronic hepatitis B. Incidence and patterns. J Hepatol 1997 Jun;26(6):1393-1395
  11. Rapid quantification of hepatitis B virus DNA by real-time PCR using fluorescent hybridization probes. J Med Microbiol 2003 May;52(Pt 5):397-402
  12. Real time TaqMan PCR detection and quantitation of HBV genotypes A-G with the use of an internal quantitation standard. J Clin Virol 2004 May;30(1):86-93
  13. Rapid quantification of hepatitis B virus DNA by automated sample preparation and realtime PCR. J Clin Microbiol 2004 Jun;42(6):2445-2449
  14. Real-time PCR assay using molecular beacon for quantitation of hepatitis B virus DNA. J Clin Microbiol 2004 Aug;42(8):3438- 3440. Table 3: Comparison between real-time-PCR assay and HC2 assay for HBV DNA detection (n = 66) HBeAg status Number of cases (%) HBV DNA by real-time-PCR HBV DNA by HC2 assay Detectable Undetectable Detectable Undetectable Positive 39 (59.09)# 39 (100) 6.37 ± 1.89* 0 29 (74.36) 7.13 ± 1.09* 10 (25.64) Negative 27 (40.91) 21 (77.78) 5.09 ± 1.65* 6 (22.22) 11 (40.74) 6.46 ± 0.96* 16 (59.26) Total 66 60 (90.91) 5.93 ± 1.90* 6 (9.09) 40 (60.61) 6.95 ± 1.08* 26 (39.39) #Figure within parentheses indicates percentage; *HBV DNA (mean ± SD) [log10 (copies/ml)]. PCR: Polymerase chain reaction; HBV: Hepatitiis B virus; HC2; Hybrid capture 2 Comparison of Hybrid Capture 2 Assay with Real-time-PCR for Detection and Quantitation of Hepatitis B Virus DNA Euroasian Journal of Hepato-Gastroenterology, January-June 2014;4(1):31-35 35 EJOHG 15. Aspinall S, Steele AD, Peenze I, Mphahlele MJ. Detection and quantitation of hepatitis B virus DNA: comparison of two commercial hybridization assays with polymerase chain reaction. J Viral Hepat 1995;2(2):107-111
  15. Development of a quantitative real-time detection assay for hepatitis B virus DNA and comparison with two commercial assays. J Clin Microbiol 2000 Aug;38(8):2897-2901
  16. Comparison of real-time PCR assays for monitoring serum hepatitis B virus DNA levels during antiviral therapy. J Clin Microbiol 2006 Aug;44(8):2983-2987
  17. Real-time PCR assay for detection and quantification of hepatitis B virus genotypes A to G. J Clin Microbiol 2006 Sep;44(9):3325-3333.
PDF Share
PDF Share

© Jaypee Brothers Medical Publishers (P) LTD.